Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ApoeP08226 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
ApoeP08226 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.83□□□□□ -0.2
ApoeP08226 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
ApoeP08226 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
ApoeP08226 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ApoeP08226 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.83□□□□□ -0.2
ApoeP08226 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ApoeP08226 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.83□□□□□ -0.2
ApoeP08226 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ApoeP08226 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ApoeP08226 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.82□□□□□ -0.2
ApoeP08226 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
ApoeP08226 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
ApoeP08226 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ApoeP08226 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
ApoeP08226 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ApoeP08226 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ApoeP08226 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ApoeP08226 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.82□□□□□ -0.2
ApoeP08226 Gm11780-201ENSMUST00000136880 516 ntBASIC13.82□□□□□ -0.2
ApoeP08226 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.82□□□□□ -0.2
ApoeP08226 Gm6659-201ENSMUST00000174752 547 ntBASIC13.82□□□□□ -0.2
ApoeP08226 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ApoeP08226 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.82□□□□□ -0.2
ApoeP08226 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.82□□□□□ -0.2
ApoeP08226 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.82□□□□□ -0.2
ApoeP08226 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.82□□□□□ -0.2
ApoeP08226 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
ApoeP08226 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ApoeP08226 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ApoeP08226 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ApoeP08226 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.82□□□□□ -0.2
ApoeP08226 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ApoeP08226 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ApoeP08226 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ApoeP08226 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.82□□□□□ -0.2
ApoeP08226 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ApoeP08226 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ApoeP08226 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ApoeP08226 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ApoeP08226 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ApoeP08226 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ApoeP08226 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ApoeP08226 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ApoeP08226 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ApoeP08226 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ApoeP08226 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.81□□□□□ -0.2
ApoeP08226 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ApoeP08226 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.81□□□□□ -0.2
ApoeP08226 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.81□□□□□ -0.2
ApoeP08226 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ApoeP08226 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ApoeP08226 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ApoeP08226 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
ApoeP08226 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ApoeP08226 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.81□□□□□ -0.2
ApoeP08226 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ApoeP08226 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ApoeP08226 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.81□□□□□ -0.2
ApoeP08226 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.81□□□□□ -0.2
ApoeP08226 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ApoeP08226 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ApoeP08226 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ApoeP08226 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ApoeP08226 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ApoeP08226 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ApoeP08226 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ApoeP08226 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.8□□□□□ -0.2
ApoeP08226 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ApoeP08226 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ApoeP08226 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ApoeP08226 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ApoeP08226 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ApoeP08226 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ApoeP08226 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ApoeP08226 Gm8749-201ENSMUST00000117737 331 ntBASIC13.8□□□□□ -0.2
ApoeP08226 Gm9726-201ENSMUST00000180321 678 ntBASIC13.8□□□□□ -0.2
ApoeP08226 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ApoeP08226 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.8□□□□□ -0.2
ApoeP08226 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms