Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P06336 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P06336 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06336 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P06336 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.49□□□□□ -0.25
P06336 Gm18889-201ENSMUST00000174284 929 ntBASIC13.49□□□□□ -0.25
P06336 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P06336 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.49□□□□□ -0.25
P06336 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.49□□□□□ -0.25
P06336 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06336 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P06336 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
P06336 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
P06336 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06336 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06336 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06336 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P06336 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P06336 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
P06336 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06336 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06336 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.49□□□□□ -0.25
P06336 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06336 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.49□□□□□ -0.25
P06336 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.49□□□□□ -0.25
P06336 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
P06336 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06336 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
P06336 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P06336 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
P06336 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06336 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06336 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
P06336 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06336 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
P06336 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.48□□□□□ -0.25
P06336 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06336 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P06336 Gm5479-201ENSMUST00000160578 435 ntBASIC13.48□□□□□ -0.25
P06336 Gm18737-201ENSMUST00000173594 937 ntBASIC13.48□□□□□ -0.25
P06336 Olfr286-202ENSMUST00000205305 969 ntBASIC13.48□□□□□ -0.25
P06336 Gm45098-201ENSMUST00000207179 657 ntBASIC13.48□□□□□ -0.25
P06336 Chchd1-203ENSMUST00000224633 557 ntBASIC13.48□□□□□ -0.25
P06336 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.48□□□□□ -0.25
P06336 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06336 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
P06336 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06336 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06336 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06336 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06336 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
P06336 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06336 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06336 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06336 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
P06336 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06336 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P06336 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06336 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P06336 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.47□□□□□ -0.25
P06336 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P06336 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06336 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
P06336 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
P06336 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06336 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
P06336 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P06336 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06336 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P06336 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06336 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.47□□□□□ -0.25
P06336 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06336 Gm23935-201ENSMUST00000102303 57 ntBASIC13.47□□□□□ -0.25
P06336 Gm24270-201ENSMUST00000102326 57 ntBASIC13.47□□□□□ -0.25
P06336 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.47□□□□□ -0.25
P06336 Gm24245-201ENSMUST00000157318 57 ntBASIC13.47□□□□□ -0.25
P06336 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P06336 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.47□□□□□ -0.25
P06336 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.47□□□□□ -0.25
P06336 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.47□□□□□ -0.25
P06336 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
P06336 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06336 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.47□□□□□ -0.25
P06336 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06336 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
P06336 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06336 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P06336 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06336 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
P06336 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06336 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06336 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06336 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06336 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06336 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
P06336 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06336 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06336 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06336 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06336 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 117.2 ms