Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3cP02301 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3cP02301 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3cP02301 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
H3f3cP02301 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
H3f3cP02301 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3cP02301 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.55□□□□□ -0.4
H3f3cP02301 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3cP02301 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3cP02301 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3cP02301 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3cP02301 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
H3f3cP02301 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.55□□□□□ -0.4
H3f3cP02301 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.55□□□□□ -0.4
H3f3cP02301 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
H3f3cP02301 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
H3f3cP02301 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.54□□□□□ -0.4
H3f3cP02301 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
H3f3cP02301 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
H3f3cP02301 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
H3f3cP02301 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
H3f3cP02301 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.54□□□□□ -0.4
H3f3cP02301 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.54□□□□□ -0.4
H3f3cP02301 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.54□□□□□ -0.4
H3f3cP02301 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
H3f3cP02301 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.54□□□□□ -0.4
H3f3cP02301 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
H3f3cP02301 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
H3f3cP02301 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
H3f3cP02301 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.53□□□□□ -0.4
H3f3cP02301 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.53□□□□□ -0.4
H3f3cP02301 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.53□□□□□ -0.4
H3f3cP02301 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.53□□□□□ -0.4
H3f3cP02301 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.53□□□□□ -0.4
H3f3cP02301 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.53□□□□□ -0.4
H3f3cP02301 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
H3f3cP02301 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.53□□□□□ -0.4
H3f3cP02301 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.53□□□□□ -0.4
H3f3cP02301 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
H3f3cP02301 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H3f3cP02301 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
H3f3cP02301 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H3f3cP02301 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H3f3cP02301 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H3f3cP02301 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
H3f3cP02301 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H3f3cP02301 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H3f3cP02301 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
H3f3cP02301 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.52□□□□□ -0.4
H3f3cP02301 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
H3f3cP02301 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H3f3cP02301 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H3f3cP02301 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H3f3cP02301 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H3f3cP02301 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.52□□□□□ -0.41
H3f3cP02301 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms