Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Hdac3O88895 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Hdac3O88895 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.1□□□□□ -0.31
Hdac3O88895 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Hdac3O88895 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Celf4-206ENSMUST00000224553 1729 ntBASIC13.1□□□□□ -0.31
Hdac3O88895 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Hdac3O88895 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdac3O88895 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
Hdac3O88895 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.1□□□□□ -0.31
Hdac3O88895 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Hdac3O88895 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Hdac3O88895 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Hdac3O88895 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.09□□□□□ -0.31
Hdac3O88895 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.09□□□□□ -0.31
Hdac3O88895 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Mir5131-201ENSMUST00000175426 93 ntBASIC13.09□□□□□ -0.31
Hdac3O88895 Gm4899-201ENSMUST00000178708 719 ntBASIC13.09□□□□□ -0.31
Hdac3O88895 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.09□□□□□ -0.31
Hdac3O88895 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.09□□□□□ -0.31
Hdac3O88895 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Grk6-207ENSMUST00000225925 2769 ntBASIC13.09□□□□□ -0.31
Hdac3O88895 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Gm15590-201ENSMUST00000078419 552 ntBASIC13.09□□□□□ -0.31
Hdac3O88895 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Hdac3O88895 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Hdac3O88895 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Hdac3O88895 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.09□□□□□ -0.31
Hdac3O88895 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hdac3O88895 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hdac3O88895 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hdac3O88895 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hdac3O88895 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hdac3O88895 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hdac3O88895 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Hdac3O88895 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Hdac3O88895 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hdac3O88895 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Hdac3O88895 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hdac3O88895 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hdac3O88895 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hdac3O88895 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.08□□□□□ -0.32
Hdac3O88895 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Hdac3O88895 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hdac3O88895 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Hdac3O88895 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hdac3O88895 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hdac3O88895 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hdac3O88895 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hdac3O88895 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hdac3O88895 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hdac3O88895 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hdac3O88895 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hdac3O88895 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hdac3O88895 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Hdac3O88895 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.08□□□□□ -0.32
Hdac3O88895 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms