Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn3O88705 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Hcn3O88705 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn3O88705 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn3O88705 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn3O88705 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn3O88705 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn3O88705 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn3O88705 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn3O88705 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn3O88705 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Hcn3O88705 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Hcn3O88705 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Hcn3O88705 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn3O88705 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn3O88705 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn3O88705 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Hcn3O88705 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn3O88705 Gm7153-201ENSMUST00000117092 455 ntBASIC13.99□□□□□ -0.17
Hcn3O88705 Gm4459-201ENSMUST00000118750 468 ntBASIC13.99□□□□□ -0.17
Hcn3O88705 Gm12497-201ENSMUST00000138778 237 ntBASIC13.99□□□□□ -0.17
Hcn3O88705 Gm27459-201ENSMUST00000184860 107 ntBASIC13.99□□□□□ -0.17
Hcn3O88705 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.99□□□□□ -0.17
Hcn3O88705 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Hcn3O88705 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.99□□□□□ -0.17
Hcn3O88705 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn3O88705 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.99□□□□□ -0.17
Hcn3O88705 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn3O88705 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn3O88705 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn3O88705 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn3O88705 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn3O88705 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn3O88705 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn3O88705 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn3O88705 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn3O88705 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Hcn3O88705 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Hcn3O88705 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Hcn3O88705 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Hcn3O88705 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.98□□□□□ -0.17
Hcn3O88705 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Hcn3O88705 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.98□□□□□ -0.17
Hcn3O88705 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
Hcn3O88705 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.98□□□□□ -0.17
Hcn3O88705 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Hcn3O88705 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn3O88705 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Hcn3O88705 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.97□□□□□ -0.17
Hcn3O88705 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn3O88705 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn3O88705 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.97□□□□□ -0.17
Hcn3O88705 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn3O88705 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn3O88705 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn3O88705 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.97□□□□□ -0.17
Hcn3O88705 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Hcn3O88705 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn3O88705 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.97□□□□□ -0.17
Hcn3O88705 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn3O88705 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.97□□□□□ -0.17
Hcn3O88705 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.97□□□□□ -0.17
Hcn3O88705 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Hcn3O88705 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn3O88705 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn3O88705 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Hcn3O88705 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn3O88705 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn3O88705 Grk6-207ENSMUST00000225925 2769 ntBASIC13.97□□□□□ -0.17
Hcn3O88705 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn3O88705 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn3O88705 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Hcn3O88705 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms