Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cops6O88545 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cops6O88545 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cops6O88545 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
Cops6O88545 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cops6O88545 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cops6O88545 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cops6O88545 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cops6O88545 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cops6O88545 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cops6O88545 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cops6O88545 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cops6O88545 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cops6O88545 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cops6O88545 Gm7653-201ENSMUST00000214567 508 ntBASIC17.77■□□□□ 0.44
Cops6O88545 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.77■□□□□ 0.44
Cops6O88545 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.77■□□□□ 0.44
Cops6O88545 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cops6O88545 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cops6O88545 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cops6O88545 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cops6O88545 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cops6O88545 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cops6O88545 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cops6O88545 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
Cops6O88545 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Cops6O88545 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cops6O88545 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cops6O88545 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cops6O88545 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.76■□□□□ 0.43
Cops6O88545 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cops6O88545 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.76■□□□□ 0.43
Cops6O88545 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cops6O88545 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.76■□□□□ 0.43
Cops6O88545 Sybu-209ENSMUST00000228639 4113 ntBASIC17.76■□□□□ 0.43
Cops6O88545 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cops6O88545 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cops6O88545 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cops6O88545 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cops6O88545 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.76■□□□□ 0.43
Cops6O88545 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cops6O88545 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cops6O88545 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cops6O88545 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cops6O88545 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cops6O88545 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cops6O88545 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cops6O88545 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.76■□□□□ 0.43
Cops6O88545 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cops6O88545 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cops6O88545 Gm21854-201ENSMUST00000179901 471 ntBASIC17.76■□□□□ 0.43
Cops6O88545 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cops6O88545 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cops6O88545 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cops6O88545 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cops6O88545 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cops6O88545 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.76■□□□□ 0.43
Cops6O88545 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cops6O88545 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cops6O88545 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cops6O88545 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cops6O88545 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cops6O88545 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.75■□□□□ 0.43
Cops6O88545 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cops6O88545 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cops6O88545 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cops6O88545 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cops6O88545 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cops6O88545 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.75■□□□□ 0.43
Cops6O88545 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cops6O88545 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cops6O88545 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cops6O88545 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cops6O88545 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Cops6O88545 Gm12490-201ENSMUST00000120255 560 ntBASIC17.75■□□□□ 0.43
Cops6O88545 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cops6O88545 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC17.75■□□□□ 0.43
Cops6O88545 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC17.75■□□□□ 0.43
Cops6O88545 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.75■□□□□ 0.43
Cops6O88545 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cops6O88545 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cops6O88545 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cops6O88545 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cops6O88545 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cops6O88545 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cops6O88545 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cops6O88545 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cops6O88545 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cops6O88545 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Cops6O88545 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cops6O88545 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cops6O88545 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cops6O88545 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cops6O88545 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cops6O88545 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cops6O88545 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cops6O88545 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cops6O88545 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC17.74■□□□□ 0.43
Cops6O88545 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Cops6O88545 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms