Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cops3O88543 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.12□□□□□ -0.31
Cops3O88543 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cops3O88543 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.12□□□□□ -0.31
Cops3O88543 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cops3O88543 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.11□□□□□ -0.31
Cops3O88543 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cops3O88543 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops3O88543 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cops3O88543 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cops3O88543 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops3O88543 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops3O88543 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops3O88543 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops3O88543 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops3O88543 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops3O88543 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cops3O88543 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops3O88543 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Cops3O88543 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.11□□□□□ -0.31
Cops3O88543 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cops3O88543 Gm28033-201ENSMUST00000184224 96 ntBASIC13.11□□□□□ -0.31
Cops3O88543 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.11□□□□□ -0.31
Cops3O88543 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cops3O88543 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops3O88543 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops3O88543 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops3O88543 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Cops3O88543 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops3O88543 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cops3O88543 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cops3O88543 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Cops3O88543 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.1□□□□□ -0.31
Cops3O88543 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Cops3O88543 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.1□□□□□ -0.31
Cops3O88543 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.1□□□□□ -0.31
Cops3O88543 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cops3O88543 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cops3O88543 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.1□□□□□ -0.31
Cops3O88543 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Cops3O88543 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.1□□□□□ -0.31
Cops3O88543 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cops3O88543 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cops3O88543 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops3O88543 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Cops3O88543 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.09□□□□□ -0.31
Cops3O88543 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops3O88543 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
Cops3O88543 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops3O88543 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops3O88543 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cops3O88543 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops3O88543 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops3O88543 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops3O88543 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops3O88543 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops3O88543 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Cops3O88543 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops3O88543 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops3O88543 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops3O88543 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cops3O88543 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.09□□□□□ -0.31
Cops3O88543 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops3O88543 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.09□□□□□ -0.31
Cops3O88543 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.09□□□□□ -0.31
Cops3O88543 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cops3O88543 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Cops3O88543 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops3O88543 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cops3O88543 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.09□□□□□ -0.31
Cops3O88543 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.09□□□□□ -0.31
Cops3O88543 Gm34391-201ENSMUST00000203706 907 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms