Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Dnmt3bO88509 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dnmt3bO88509 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.11□□□□□ -0.15
Dnmt3bO88509 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dnmt3bO88509 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dnmt3bO88509 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dnmt3bO88509 Gm8344-201ENSMUST00000119813 856 ntBASIC14.11□□□□□ -0.15
Dnmt3bO88509 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.11□□□□□ -0.15
Dnmt3bO88509 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dnmt3bO88509 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.11□□□□□ -0.15
Dnmt3bO88509 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Dnmt3bO88509 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dnmt3bO88509 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dnmt3bO88509 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dnmt3bO88509 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dnmt3bO88509 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.11□□□□□ -0.15
Dnmt3bO88509 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dnmt3bO88509 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Dnmt3bO88509 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dnmt3bO88509 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Dnmt3bO88509 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Dnmt3bO88509 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dnmt3bO88509 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Dnmt3bO88509 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dnmt3bO88509 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Dnmt3bO88509 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.09□□□□□ -0.15
Dnmt3bO88509 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.09□□□□□ -0.15
Dnmt3bO88509 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.09□□□□□ -0.15
Dnmt3bO88509 Gm5186-201ENSMUST00000218781 920 ntBASIC14.09□□□□□ -0.15
Dnmt3bO88509 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Dnmt3bO88509 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.09□□□□□ -0.15
Dnmt3bO88509 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Dnmt3bO88509 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Dnmt3bO88509 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Dnmt3bO88509 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Dnmt3bO88509 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Dnmt3bO88509 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Dnmt3bO88509 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Dnmt3bO88509 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Dnmt3bO88509 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Dnmt3bO88509 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Dnmt3bO88509 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.08□□□□□ -0.16
Dnmt3bO88509 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Dnmt3bO88509 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Dnmt3bO88509 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Dnmt3bO88509 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.08□□□□□ -0.16
Dnmt3bO88509 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms