Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.52□□□□□ -0.25
Tnfrsf17O88472 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf17O88472 Gm27243-201ENSMUST00000183964 521 ntBASIC13.52□□□□□ -0.25
Tnfrsf17O88472 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf17O88472 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.52□□□□□ -0.25
Tnfrsf17O88472 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf17O88472 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Tnfrsf17O88472 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf17O88472 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf17O88472 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf17O88472 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf17O88472 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf17O88472 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf17O88472 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.52□□□□□ -0.25
Tnfrsf17O88472 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf17O88472 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf17O88472 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf17O88472 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf17O88472 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfrsf17O88472 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Gm16570-201ENSMUST00000161951 436 ntBASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Gm26461-201ENSMUST00000175064 290 ntBASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Gm37466-201ENSMUST00000195692 652 ntBASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Gm6916-202ENSMUST00000205523 195 ntBASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfrsf17O88472 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Gm5279-201ENSMUST00000199575 745 ntBASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Gm18056-201ENSMUST00000207670 568 ntBASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Gm18061-201ENSMUST00000208350 562 ntBASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Gm18063-201ENSMUST00000208529 568 ntBASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Gm18052-201ENSMUST00000208750 559 ntBASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Gm7561-201ENSMUST00000211203 886 ntBASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf17O88472 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.49□□□□□ -0.25
Tnfrsf17O88472 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf17O88472 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf17O88472 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms