Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cfdp1O88271 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cfdp1O88271 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfdp1O88271 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfdp1O88271 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfdp1O88271 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.19■□□□□ 0.5
Cfdp1O88271 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC18.19■□□□□ 0.5
Cfdp1O88271 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cfdp1O88271 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cfdp1O88271 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.19■□□□□ 0.5
Cfdp1O88271 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfdp1O88271 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfdp1O88271 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cfdp1O88271 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cfdp1O88271 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cfdp1O88271 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
Cfdp1O88271 Camk2g-217ENSMUST00000226630 1937 ntBASIC18.19■□□□□ 0.5
Cfdp1O88271 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfdp1O88271 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfdp1O88271 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfdp1O88271 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfdp1O88271 Carlr-201ENSMUST00000181515 2574 ntBASIC18.19■□□□□ 0.5
Cfdp1O88271 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfdp1O88271 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cfdp1O88271 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfdp1O88271 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC18.19■□□□□ 0.5
Cfdp1O88271 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfdp1O88271 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfdp1O88271 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Cfdp1O88271 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfdp1O88271 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cfdp1O88271 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC18.18■□□□□ 0.5
Cfdp1O88271 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfdp1O88271 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cfdp1O88271 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfdp1O88271 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.18■□□□□ 0.5
Cfdp1O88271 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfdp1O88271 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfdp1O88271 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cfdp1O88271 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC18.18■□□□□ 0.5
Cfdp1O88271 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.18■□□□□ 0.5
Cfdp1O88271 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfdp1O88271 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cfdp1O88271 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfdp1O88271 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cfdp1O88271 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfdp1O88271 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cfdp1O88271 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cfdp1O88271 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Cfdp1O88271 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfdp1O88271 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfdp1O88271 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.17■□□□□ 0.5
Cfdp1O88271 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfdp1O88271 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfdp1O88271 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfdp1O88271 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cfdp1O88271 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfdp1O88271 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfdp1O88271 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cfdp1O88271 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfdp1O88271 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cfdp1O88271 Gm27622-201ENSMUST00000183779 60 ntBASIC18.17■□□□□ 0.5
Cfdp1O88271 Gm28630-201ENSMUST00000187806 498 ntBASIC18.17■□□□□ 0.5
Cfdp1O88271 AC126408.1-201ENSMUST00000225184 523 ntBASIC18.17■□□□□ 0.5
Cfdp1O88271 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.17■□□□□ 0.5
Cfdp1O88271 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.17■□□□□ 0.5
Cfdp1O88271 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cfdp1O88271 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cfdp1O88271 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfdp1O88271 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfdp1O88271 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cfdp1O88271 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfdp1O88271 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfdp1O88271 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfdp1O88271 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.16■□□□□ 0.5
Cfdp1O88271 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfdp1O88271 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfdp1O88271 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfdp1O88271 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfdp1O88271 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC18.16■□□□□ 0.5
Cfdp1O88271 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Cfdp1O88271 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC18.16■□□□□ 0.5
Cfdp1O88271 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC18.16■□□□□ 0.5
Cfdp1O88271 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cfdp1O88271 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Cfdp1O88271 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfdp1O88271 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfdp1O88271 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfdp1O88271 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfdp1O88271 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfdp1O88271 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cfdp1O88271 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfdp1O88271 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cfdp1O88271 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfdp1O88271 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cfdp1O88271 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfdp1O88271 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.15■□□□□ 0.5
Cfdp1O88271 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfdp1O88271 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfdp1O88271 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms