Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Chrna4O70174 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna4O70174 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna4O70174 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna4O70174 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna4O70174 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna4O70174 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna4O70174 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna4O70174 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna4O70174 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.74□□□□□ -0.05
Chrna4O70174 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna4O70174 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.74□□□□□ -0.05
Chrna4O70174 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna4O70174 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.74□□□□□ -0.05
Chrna4O70174 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.74□□□□□ -0.05
Chrna4O70174 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.74□□□□□ -0.05
Chrna4O70174 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna4O70174 Gm5479-201ENSMUST00000160578 435 ntBASIC14.74□□□□□ -0.05
Chrna4O70174 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.74□□□□□ -0.05
Chrna4O70174 Gm27920-201ENSMUST00000183953 96 ntBASIC14.74□□□□□ -0.05
Chrna4O70174 Gm45612-201ENSMUST00000211320 160 ntBASIC14.74□□□□□ -0.05
Chrna4O70174 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.74□□□□□ -0.05
Chrna4O70174 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.74□□□□□ -0.05
Chrna4O70174 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Chrna4O70174 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna4O70174 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna4O70174 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.74□□□□□ -0.05
Chrna4O70174 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna4O70174 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.74□□□□□ -0.05
Chrna4O70174 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna4O70174 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna4O70174 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.74□□□□□ -0.05
Chrna4O70174 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna4O70174 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna4O70174 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Chrna4O70174 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Chrna4O70174 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Chrna4O70174 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Chrna4O70174 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.73□□□□□ -0.05
Chrna4O70174 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
Chrna4O70174 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.73□□□□□ -0.05
Chrna4O70174 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.73□□□□□ -0.05
Chrna4O70174 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.73□□□□□ -0.05
Chrna4O70174 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Chrna4O70174 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Chrna4O70174 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.73□□□□□ -0.05
Chrna4O70174 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Chrna4O70174 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Chrna4O70174 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Chrna4O70174 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna4O70174 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.73□□□□□ -0.05
Chrna4O70174 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.73□□□□□ -0.05
Chrna4O70174 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Chrna4O70174 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chrna4O70174 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chrna4O70174 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chrna4O70174 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chrna4O70174 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Chrna4O70174 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chrna4O70174 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chrna4O70174 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.72□□□□□ -0.05
Chrna4O70174 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chrna4O70174 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chrna4O70174 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chrna4O70174 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chrna4O70174 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Chrna4O70174 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Chrna4O70174 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chrna4O70174 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chrna4O70174 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chrna4O70174 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chrna4O70174 Gm11745-201ENSMUST00000121669 448 ntBASIC14.72□□□□□ -0.05
Chrna4O70174 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chrna4O70174 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chrna4O70174 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.72□□□□□ -0.05
Chrna4O70174 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
Chrna4O70174 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chrna4O70174 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 159 ms