Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.33□□□□□ -0.28
Alx3O70137 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.33□□□□□ -0.28
Alx3O70137 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.33□□□□□ -0.28
Alx3O70137 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx3O70137 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Alx3O70137 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Alx3O70137 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx3O70137 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx3O70137 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Alx3O70137 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Alx3O70137 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.33□□□□□ -0.28
Alx3O70137 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx3O70137 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Alx3O70137 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Alx3O70137 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Alx3O70137 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx3O70137 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.33□□□□□ -0.28
Alx3O70137 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx3O70137 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx3O70137 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx3O70137 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Alx3O70137 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Alx3O70137 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Alx3O70137 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Alx3O70137 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Alx3O70137 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.32□□□□□ -0.28
Alx3O70137 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Alx3O70137 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Alx3O70137 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Alx3O70137 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC13.32□□□□□ -0.28
Alx3O70137 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.32□□□□□ -0.28
Alx3O70137 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.32□□□□□ -0.28
Alx3O70137 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Alx3O70137 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
Alx3O70137 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.32□□□□□ -0.28
Alx3O70137 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.32□□□□□ -0.28
Alx3O70137 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Alx3O70137 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Alx3O70137 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Alx3O70137 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Alx3O70137 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.31□□□□□ -0.28
Alx3O70137 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 AC154849.3-201ENSMUST00000223733 1660 ntBASIC13.31□□□□□ -0.28
Alx3O70137 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Alx3O70137 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Alx3O70137 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Alx3O70137 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Alx3O70137 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Alx3O70137 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Alx3O70137 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.31□□□□□ -0.28
Alx3O70137 AV026068-213ENSMUST00000223675 1171 ntBASIC13.31□□□□□ -0.28
Alx3O70137 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.31□□□□□ -0.28
Alx3O70137 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.31□□□□□ -0.28
Alx3O70137 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Alx3O70137 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms