Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Rpl35aO55142 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.89□□□□□ -0.67
Rpl35aO55142 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Rpl35aO55142 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Gm14701-201ENSMUST00000117156 348 ntBASIC10.89□□□□□ -0.67
Rpl35aO55142 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC10.89□□□□□ -0.67
Rpl35aO55142 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Gm13365-201ENSMUST00000121188 973 ntBASIC10.89□□□□□ -0.67
Rpl35aO55142 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Gm12017-201ENSMUST00000122453 1003 ntBASIC10.89□□□□□ -0.67
Rpl35aO55142 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC10.89□□□□□ -0.67
Rpl35aO55142 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC10.89□□□□□ -0.67
Rpl35aO55142 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rpl35aO55142 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC10.89□□□□□ -0.67
Rpl35aO55142 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rpl35aO55142 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Rpl35aO55142 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rpl35aO55142 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC10.89□□□□□ -0.67
Rpl35aO55142 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rpl35aO55142 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl35aO55142 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Rpl35aO55142 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rpl35aO55142 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rpl35aO55142 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Rpl35aO55142 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Rpl35aO55142 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC10.88□□□□□ -0.67
Rpl35aO55142 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Gm16026-204ENSMUST00000162652 683 ntBASIC10.88□□□□□ -0.67
Rpl35aO55142 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.88□□□□□ -0.67
Rpl35aO55142 Gm44335-201ENSMUST00000196879 141 ntBASIC10.88□□□□□ -0.67
Rpl35aO55142 Gm44297-201ENSMUST00000198304 141 ntBASIC10.88□□□□□ -0.67
Rpl35aO55142 Gm44346-201ENSMUST00000198851 141 ntBASIC10.88□□□□□ -0.67
Rpl35aO55142 Gm20553-201ENSMUST00000204205 844 ntBASIC10.88□□□□□ -0.67
Rpl35aO55142 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.88□□□□□ -0.67
Rpl35aO55142 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.88□□□□□ -0.67
Rpl35aO55142 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Rpl35aO55142 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Rpl35aO55142 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Gm13332-201ENSMUST00000120451 1398 ntBASIC10.88□□□□□ -0.67
Rpl35aO55142 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC10.88□□□□□ -0.67
Rpl35aO55142 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl35aO55142 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC10.88□□□□□ -0.67
Rpl35aO55142 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl35aO55142 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl35aO55142 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rpl35aO55142 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl35aO55142 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC10.87□□□□□ -0.67
Rpl35aO55142 Gm6018-201ENSMUST00000216090 1306 ntBASIC10.87□□□□□ -0.67
Rpl35aO55142 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Rpl35aO55142 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl35aO55142 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl35aO55142 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms