Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.25□□□□□ -0.45
Ccr6O54689 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.25□□□□□ -0.45
Ccr6O54689 Gm12497-201ENSMUST00000138778 237 ntBASIC12.25□□□□□ -0.45
Ccr6O54689 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.25□□□□□ -0.45
Ccr6O54689 Gm37055-201ENSMUST00000191866 133 ntBASIC12.25□□□□□ -0.45
Ccr6O54689 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccr6O54689 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccr6O54689 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccr6O54689 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccr6O54689 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccr6O54689 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccr6O54689 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccr6O54689 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.25□□□□□ -0.45
Ccr6O54689 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.25□□□□□ -0.45
Ccr6O54689 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccr6O54689 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccr6O54689 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccr6O54689 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccr6O54689 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccr6O54689 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccr6O54689 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccr6O54689 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccr6O54689 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccr6O54689 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.24□□□□□ -0.45
Ccr6O54689 Gm45328-201ENSMUST00000210942 917 ntBASIC12.24□□□□□ -0.45
Ccr6O54689 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccr6O54689 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccr6O54689 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccr6O54689 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccr6O54689 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccr6O54689 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccr6O54689 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccr6O54689 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccr6O54689 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.23□□□□□ -0.45
Ccr6O54689 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccr6O54689 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccr6O54689 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.23□□□□□ -0.45
Ccr6O54689 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccr6O54689 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccr6O54689 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccr6O54689 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccr6O54689 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccr6O54689 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.23□□□□□ -0.45
Ccr6O54689 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccr6O54689 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccr6O54689 Gm8749-201ENSMUST00000117737 331 ntBASIC12.23□□□□□ -0.45
Ccr6O54689 Gm4459-201ENSMUST00000118750 468 ntBASIC12.23□□□□□ -0.45
Ccr6O54689 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.23□□□□□ -0.45
Ccr6O54689 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.23□□□□□ -0.45
Ccr6O54689 Mir3081-201ENSMUST00000175305 84 ntBASIC12.23□□□□□ -0.45
Ccr6O54689 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.23□□□□□ -0.45
Ccr6O54689 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccr6O54689 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccr6O54689 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.23□□□□□ -0.45
Ccr6O54689 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccr6O54689 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccr6O54689 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccr6O54689 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccr6O54689 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccr6O54689 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccr6O54689 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccr6O54689 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccr6O54689 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccr6O54689 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccr6O54689 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccr6O54689 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccr6O54689 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccr6O54689 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccr6O54689 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccr6O54689 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccr6O54689 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccr6O54689 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccr6O54689 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccr6O54689 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms