Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.03■□□□□ 0.16
Sptlc1O35704 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sptlc1O35704 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sptlc1O35704 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sptlc1O35704 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sptlc1O35704 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sptlc1O35704 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sptlc1O35704 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.03■□□□□ 0.16
Sptlc1O35704 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Sptlc1O35704 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sptlc1O35704 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sptlc1O35704 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.03■□□□□ 0.16
Sptlc1O35704 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sptlc1O35704 Gm27631-201ENSMUST00000184163 466 ntBASIC16.03■□□□□ 0.16
Sptlc1O35704 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC16.03■□□□□ 0.16
Sptlc1O35704 Gm29107-201ENSMUST00000190910 347 ntBASIC16.03■□□□□ 0.16
Sptlc1O35704 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.03■□□□□ 0.16
Sptlc1O35704 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.03■□□□□ 0.16
Sptlc1O35704 Olfr286-202ENSMUST00000205305 969 ntBASIC16.03■□□□□ 0.16
Sptlc1O35704 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC16.03■□□□□ 0.16
Sptlc1O35704 Gm35638-201ENSMUST00000220724 652 ntBASIC16.03■□□□□ 0.16
Sptlc1O35704 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Sptlc1O35704 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sptlc1O35704 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sptlc1O35704 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Sptlc1O35704 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sptlc1O35704 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.03■□□□□ 0.16
Sptlc1O35704 Syt7-205ENSMUST00000224135 1557 ntBASIC16.03■□□□□ 0.16
Sptlc1O35704 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sptlc1O35704 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.03■□□□□ 0.16
Sptlc1O35704 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sptlc1O35704 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sptlc1O35704 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sptlc1O35704 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sptlc1O35704 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sptlc1O35704 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sptlc1O35704 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
Sptlc1O35704 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sptlc1O35704 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Sptlc1O35704 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sptlc1O35704 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.02■□□□□ 0.16
Sptlc1O35704 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sptlc1O35704 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sptlc1O35704 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Sptlc1O35704 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sptlc1O35704 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sptlc1O35704 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
Sptlc1O35704 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sptlc1O35704 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Sptlc1O35704 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.02■□□□□ 0.16
Sptlc1O35704 Gm37230-201ENSMUST00000194491 818 ntBASIC16.02■□□□□ 0.16
Sptlc1O35704 Gm43703-201ENSMUST00000200523 763 ntBASIC16.02■□□□□ 0.16
Sptlc1O35704 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.02■□□□□ 0.16
Sptlc1O35704 Dupd1-202ENSMUST00000224735 548 ntBASIC16.02■□□□□ 0.16
Sptlc1O35704 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sptlc1O35704 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sptlc1O35704 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sptlc1O35704 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sptlc1O35704 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sptlc1O35704 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sptlc1O35704 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.02■□□□□ 0.15
Sptlc1O35704 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.02■□□□□ 0.15
Sptlc1O35704 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sptlc1O35704 Gm43435-201ENSMUST00000199996 1438 ntBASIC16.02■□□□□ 0.15
Sptlc1O35704 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.02■□□□□ 0.15
Sptlc1O35704 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.01■□□□□ 0.15
Sptlc1O35704 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.01■□□□□ 0.15
Sptlc1O35704 Gm6222-201ENSMUST00000120787 396 ntBASIC16.01■□□□□ 0.15
Sptlc1O35704 Gm11424-201ENSMUST00000121929 829 ntBASIC16.01■□□□□ 0.15
Sptlc1O35704 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC16.01■□□□□ 0.15
Sptlc1O35704 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.01■□□□□ 0.15
Sptlc1O35704 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Sptlc1O35704 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.01■□□□□ 0.15
Sptlc1O35704 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sptlc1O35704 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms