Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Npc1O35604 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
Npc1O35604 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Npc1O35604 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Npc1O35604 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.27□□□□□ -0.13
Npc1O35604 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Npc1O35604 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.27□□□□□ -0.13
Npc1O35604 Gm43125-201ENSMUST00000201724 730 ntBASIC14.27□□□□□ -0.13
Npc1O35604 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.27□□□□□ -0.13
Npc1O35604 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.27□□□□□ -0.13
Npc1O35604 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Npc1O35604 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Npc1O35604 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Npc1O35604 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Npc1O35604 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Npc1O35604 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Npc1O35604 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Npc1O35604 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Npc1O35604 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.27□□□□□ -0.13
Npc1O35604 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Npc1O35604 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.26□□□□□ -0.13
Npc1O35604 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Npc1O35604 Gm2810-201ENSMUST00000118681 990 ntBASIC14.26□□□□□ -0.13
Npc1O35604 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.26□□□□□ -0.13
Npc1O35604 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Npc1O35604 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.26□□□□□ -0.13
Npc1O35604 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.26□□□□□ -0.13
Npc1O35604 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.26□□□□□ -0.13
Npc1O35604 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.26□□□□□ -0.13
Npc1O35604 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Npc1O35604 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Npc1O35604 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Npc1O35604 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Npc1O35604 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.25□□□□□ -0.13
Npc1O35604 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Npc1O35604 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.25□□□□□ -0.13
Npc1O35604 Gm22065-201ENSMUST00000103753 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm22066-201ENSMUST00000103761 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm24932-201ENSMUST00000103763 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm24115-201ENSMUST00000103799 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm22190-201ENSMUST00000103827 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm22191-201ENSMUST00000103831 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm24721-201ENSMUST00000103849 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm28018-201ENSMUST00000103869 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm26399-201ENSMUST00000103937 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.25□□□□□ -0.13
Npc1O35604 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.25□□□□□ -0.13
Npc1O35604 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.25□□□□□ -0.13
Npc1O35604 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.25□□□□□ -0.13
Npc1O35604 Gm25349-201ENSMUST00000177728 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm23616-201ENSMUST00000177797 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm25871-201ENSMUST00000177816 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm24752-201ENSMUST00000178240 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm24496-201ENSMUST00000178287 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm25649-201ENSMUST00000178476 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm25548-201ENSMUST00000178681 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm23147-201ENSMUST00000178841 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm26095-201ENSMUST00000179270 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm22171-201ENSMUST00000179283 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm23936-201ENSMUST00000179354 110 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms