Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.93□□□□□ -0.18
Clk3O35492 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clk3O35492 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.93□□□□□ -0.18
Clk3O35492 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.93□□□□□ -0.18
Clk3O35492 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.93□□□□□ -0.18
Clk3O35492 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clk3O35492 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clk3O35492 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clk3O35492 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clk3O35492 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clk3O35492 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clk3O35492 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Clk3O35492 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.93□□□□□ -0.18
Clk3O35492 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clk3O35492 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Clk3O35492 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clk3O35492 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clk3O35492 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clk3O35492 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clk3O35492 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Clk3O35492 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk3O35492 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk3O35492 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk3O35492 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk3O35492 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk3O35492 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk3O35492 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clk3O35492 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Clk3O35492 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.92□□□□□ -0.18
Clk3O35492 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.92□□□□□ -0.18
Clk3O35492 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.92□□□□□ -0.18
Clk3O35492 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Clk3O35492 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk3O35492 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk3O35492 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk3O35492 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Clk3O35492 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk3O35492 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk3O35492 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk3O35492 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk3O35492 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk3O35492 Rubie-203ENSMUST00000227803 2430 ntBASIC13.92□□□□□ -0.18
Clk3O35492 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk3O35492 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clk3O35492 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk3O35492 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk3O35492 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clk3O35492 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Clk3O35492 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.91□□□□□ -0.18
Clk3O35492 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Clk3O35492 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Gm12008-201ENSMUST00000117791 755 ntBASIC13.91□□□□□ -0.18
Clk3O35492 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.91□□□□□ -0.18
Clk3O35492 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.91□□□□□ -0.18
Clk3O35492 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Clk3O35492 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.91□□□□□ -0.18
Clk3O35492 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
Clk3O35492 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Clk3O35492 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clk3O35492 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clk3O35492 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Clk3O35492 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clk3O35492 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clk3O35492 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Clk3O35492 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.9□□□□□ -0.18
Clk3O35492 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Clk3O35492 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clk3O35492 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.9□□□□□ -0.18
Clk3O35492 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.9□□□□□ -0.18
Clk3O35492 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clk3O35492 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clk3O35492 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.9□□□□□ -0.18
Clk3O35492 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Clk3O35492 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clk3O35492 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.9□□□□□ -0.18
Clk3O35492 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clk3O35492 Gm27628-201ENSMUST00000184911 107 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms