Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac1O09106 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac1O09106 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac1O09106 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Hdac1O09106 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Hdac1O09106 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Hdac1O09106 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac1O09106 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac1O09106 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac1O09106 Gm7153-201ENSMUST00000117092 455 ntBASIC17.38■□□□□ 0.37
Hdac1O09106 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.38■□□□□ 0.37
Hdac1O09106 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Hdac1O09106 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.38■□□□□ 0.37
Hdac1O09106 Gm2272-201ENSMUST00000194903 582 ntBASIC17.38■□□□□ 0.37
Hdac1O09106 AV026068-213ENSMUST00000223675 1171 ntBASIC17.38■□□□□ 0.37
Hdac1O09106 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Hdac1O09106 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac1O09106 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac1O09106 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac1O09106 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac1O09106 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC17.38■□□□□ 0.37
Hdac1O09106 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac1O09106 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac1O09106 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac1O09106 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hdac1O09106 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac1O09106 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC17.37■□□□□ 0.37
Hdac1O09106 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac1O09106 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac1O09106 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac1O09106 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac1O09106 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.37■□□□□ 0.37
Hdac1O09106 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac1O09106 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.37■□□□□ 0.37
Hdac1O09106 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.37■□□□□ 0.37
Hdac1O09106 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
Hdac1O09106 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac1O09106 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
Hdac1O09106 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac1O09106 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac1O09106 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac1O09106 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac1O09106 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac1O09106 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac1O09106 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac1O09106 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.37■□□□□ 0.37
Hdac1O09106 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac1O09106 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hdac1O09106 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hdac1O09106 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Hdac1O09106 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hdac1O09106 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hdac1O09106 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hdac1O09106 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hdac1O09106 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Hdac1O09106 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hdac1O09106 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Hdac1O09106 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hdac1O09106 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.36■□□□□ 0.37
Hdac1O09106 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Hdac1O09106 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hdac1O09106 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.36■□□□□ 0.37
Hdac1O09106 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.36■□□□□ 0.37
Hdac1O09106 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hdac1O09106 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hdac1O09106 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC17.36■□□□□ 0.37
Hdac1O09106 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hdac1O09106 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hdac1O09106 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hdac1O09106 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hdac1O09106 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hdac1O09106 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hdac1O09106 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hdac1O09106 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC17.35■□□□□ 0.37
Hdac1O09106 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hdac1O09106 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Hdac1O09106 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hdac1O09106 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hdac1O09106 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Hdac1O09106 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hdac1O09106 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hdac1O09106 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hdac1O09106 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hdac1O09106 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac1O09106 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac1O09106 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac1O09106 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac1O09106 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hdac1O09106 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac1O09106 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac1O09106 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac1O09106 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac1O09106 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Hdac1O09106 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.34■□□□□ 0.37
Hdac1O09106 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.34■□□□□ 0.37
Hdac1O09106 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.34■□□□□ 0.37
Hdac1O09106 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hdac1O09106 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hdac1O09106 Gm27300-201ENSMUST00000184085 97 ntBASIC17.34■□□□□ 0.37
Hdac1O09106 Gm27335-201ENSMUST00000184758 97 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms