Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Colca2F8VPY8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Colca2F8VPY8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Colca2F8VPY8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.7□□□□□ -0.22
Colca2F8VPY8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Colca2F8VPY8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Colca2F8VPY8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Colca2F8VPY8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Gm37714-201ENSMUST00000194742 342 ntBASIC13.69□□□□□ -0.22
Colca2F8VPY8 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.69□□□□□ -0.22
Colca2F8VPY8 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.69□□□□□ -0.22
Colca2F8VPY8 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.69□□□□□ -0.22
Colca2F8VPY8 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
Colca2F8VPY8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Gm24196-201ENSMUST00000179161 110 ntBASIC13.68□□□□□ -0.22
Colca2F8VPY8 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.68□□□□□ -0.22
Colca2F8VPY8 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Colca2F8VPY8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.67□□□□□ -0.22
Colca2F8VPY8 Gm26464-201ENSMUST00000157094 305 ntBASIC13.67□□□□□ -0.22
Colca2F8VPY8 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.67□□□□□ -0.22
Colca2F8VPY8 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.67□□□□□ -0.22
Colca2F8VPY8 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms