Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4aE9Q735 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4aE9Q735 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4aE9Q735 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4aE9Q735 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4aE9Q735 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4aE9Q735 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4aE9Q735 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC17.47■□□□□ 0.39
Ube4aE9Q735 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC17.47■□□□□ 0.39
Ube4aE9Q735 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4aE9Q735 Gm28760-201ENSMUST00000185995 736 ntBASIC17.47■□□□□ 0.39
Ube4aE9Q735 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.47■□□□□ 0.39
Ube4aE9Q735 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4aE9Q735 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Ube4aE9Q735 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ube4aE9Q735 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4aE9Q735 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4aE9Q735 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4aE9Q735 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Ube4aE9Q735 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4aE9Q735 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4aE9Q735 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4aE9Q735 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4aE9Q735 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4aE9Q735 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.47■□□□□ 0.39
Ube4aE9Q735 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4aE9Q735 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ube4aE9Q735 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4aE9Q735 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4aE9Q735 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4aE9Q735 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4aE9Q735 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4aE9Q735 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4aE9Q735 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4aE9Q735 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4aE9Q735 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC17.46■□□□□ 0.39
Ube4aE9Q735 Gm31326-201ENSMUST00000191856 1048 ntBASIC17.46■□□□□ 0.39
Ube4aE9Q735 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.46■□□□□ 0.39
Ube4aE9Q735 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.46■□□□□ 0.39
Ube4aE9Q735 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ube4aE9Q735 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4aE9Q735 Gm6180-201ENSMUST00000065243 498 ntBASIC17.46■□□□□ 0.39
Ube4aE9Q735 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4aE9Q735 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4aE9Q735 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4aE9Q735 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Ube4aE9Q735 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ube4aE9Q735 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4aE9Q735 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4aE9Q735 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4aE9Q735 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4aE9Q735 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4aE9Q735 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4aE9Q735 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.45■□□□□ 0.38
Ube4aE9Q735 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4aE9Q735 Gm15957-201ENSMUST00000118893 974 ntBASIC17.45■□□□□ 0.38
Ube4aE9Q735 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.45■□□□□ 0.38
Ube4aE9Q735 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4aE9Q735 Gm8515-201ENSMUST00000194852 576 ntBASIC17.45■□□□□ 0.38
Ube4aE9Q735 Gm18018-201ENSMUST00000198273 408 ntBASIC17.45■□□□□ 0.38
Ube4aE9Q735 Gm45668-201ENSMUST00000211271 493 ntBASIC17.45■□□□□ 0.38
Ube4aE9Q735 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17.45■□□□□ 0.38
Ube4aE9Q735 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.45■□□□□ 0.38
Ube4aE9Q735 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.45■□□□□ 0.38
Ube4aE9Q735 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4aE9Q735 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.45■□□□□ 0.38
Ube4aE9Q735 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4aE9Q735 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4aE9Q735 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4aE9Q735 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4aE9Q735 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ube4aE9Q735 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4aE9Q735 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4aE9Q735 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.44■□□□□ 0.38
Ube4aE9Q735 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ube4aE9Q735 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.44■□□□□ 0.38
Ube4aE9Q735 Gm15823-201ENSMUST00000064305 670 ntBASIC17.44■□□□□ 0.38
Ube4aE9Q735 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms