Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf11E9PZM7 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Gm11524-201ENSMUST00000119349 807 ntBASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Gm7783-201ENSMUST00000204795 781 ntBASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf11E9PZM7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC20.06■□□□□ 0.8
Scaf11E9PZM7 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf11E9PZM7 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf11E9PZM7 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC20.05■□□□□ 0.8
Scaf11E9PZM7 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Scaf11E9PZM7 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf11E9PZM7 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf11E9PZM7 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf11E9PZM7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf11E9PZM7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf11E9PZM7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Scaf11E9PZM7 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC20.05■□□□□ 0.8
Scaf11E9PZM7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
Scaf11E9PZM7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf11E9PZM7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf11E9PZM7 Gm13689-201ENSMUST00000119360 685 ntBASIC20.05■□□□□ 0.8
Scaf11E9PZM7 Gm12416-201ENSMUST00000120911 1008 ntBASIC20.05■□□□□ 0.8
Scaf11E9PZM7 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC20.05■□□□□ 0.8
Scaf11E9PZM7 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf11E9PZM7 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Scaf11E9PZM7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf11E9PZM7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf11E9PZM7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.04■□□□□ 0.8
Scaf11E9PZM7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC20.04■□□□□ 0.8
Scaf11E9PZM7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf11E9PZM7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf11E9PZM7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf11E9PZM7 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf11E9PZM7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf11E9PZM7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf11E9PZM7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf11E9PZM7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf11E9PZM7 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC20.04■□□□□ 0.8
Scaf11E9PZM7 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC20.04■□□□□ 0.8
Scaf11E9PZM7 Gm16177-201ENSMUST00000120728 718 ntBASIC20.04■□□□□ 0.8
Scaf11E9PZM7 Gm27516-201ENSMUST00000184237 98 ntBASIC20.04■□□□□ 0.8
Scaf11E9PZM7 Gm38002-201ENSMUST00000193255 180 ntBASIC20.04■□□□□ 0.8
Scaf11E9PZM7 Gm45880-201ENSMUST00000213041 853 ntBASIC20.04■□□□□ 0.8
Scaf11E9PZM7 Gm19309-201ENSMUST00000218295 205 ntBASIC20.04■□□□□ 0.8
Scaf11E9PZM7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC20.03■□□□□ 0.8
Scaf11E9PZM7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf11E9PZM7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf11E9PZM7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf11E9PZM7 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf11E9PZM7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Scaf11E9PZM7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf11E9PZM7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf11E9PZM7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf11E9PZM7 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf11E9PZM7 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf11E9PZM7 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf11E9PZM7 Gm22018-201ENSMUST00000104357 131 ntBASIC20.03■□□□□ 0.8
Scaf11E9PZM7 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Scaf11E9PZM7 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC20.03■□□□□ 0.8
Scaf11E9PZM7 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC20.03■□□□□ 0.8
Scaf11E9PZM7 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC20.03■□□□□ 0.8
Scaf11E9PZM7 Gm43094-201ENSMUST00000196549 921 ntBASIC20.03■□□□□ 0.8
Scaf11E9PZM7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC20.03■□□□□ 0.8
Scaf11E9PZM7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf11E9PZM7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf11E9PZM7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scaf11E9PZM7 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Scaf11E9PZM7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
Scaf11E9PZM7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scaf11E9PZM7 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC20.02■□□□□ 0.8
Scaf11E9PZM7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scaf11E9PZM7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scaf11E9PZM7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC20.02■□□□□ 0.8
Scaf11E9PZM7 Gm15808-201ENSMUST00000119046 604 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms