Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Gm5370-201ENSMUST00000187187 574 ntBASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 AC139350.3-201ENSMUST00000226151 420 ntBASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC20.19■□□□□ 0.82
Hfm1D3Z4R1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hfm1D3Z4R1 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Hfm1D3Z4R1 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hfm1D3Z4R1 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC20.17■□□□□ 0.82
Hfm1D3Z4R1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hfm1D3Z4R1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hfm1D3Z4R1 Gm14780-201ENSMUST00000118387 2737 ntBASIC20.17■□□□□ 0.82
Hfm1D3Z4R1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hfm1D3Z4R1 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC20.17■□□□□ 0.82
Hfm1D3Z4R1 Gm16342-201ENSMUST00000124025 1025 ntBASIC20.17■□□□□ 0.82
Hfm1D3Z4R1 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC20.17■□□□□ 0.82
Hfm1D3Z4R1 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC20.17■□□□□ 0.82
Hfm1D3Z4R1 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
Hfm1D3Z4R1 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hfm1D3Z4R1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hfm1D3Z4R1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hfm1D3Z4R1 Gm37812-201ENSMUST00000195216 2475 ntBASIC20.17■□□□□ 0.82
Hfm1D3Z4R1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 Gm11803-201ENSMUST00000119966 444 ntBASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 CT009713.10-202ENSMUST00000225734 696 ntBASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 AC102291.3-201ENSMUST00000226566 405 ntBASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC20.16■□□□□ 0.82
Hfm1D3Z4R1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Hfm1D3Z4R1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hfm1D3Z4R1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hfm1D3Z4R1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hfm1D3Z4R1 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hfm1D3Z4R1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hfm1D3Z4R1 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hfm1D3Z4R1 Gm12329-201ENSMUST00000120829 1007 ntBASIC20.15■□□□□ 0.82
Hfm1D3Z4R1 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hfm1D3Z4R1 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Hfm1D3Z4R1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Hfm1D3Z4R1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hfm1D3Z4R1 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hfm1D3Z4R1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Hfm1D3Z4R1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hfm1D3Z4R1 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC20.14■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms