Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.21□□□□□ -0.3
Ccnb1ip1D3Z3K2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Gm21814-202ENSMUST00000203277 873 ntBASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccnb1ip1D3Z3K2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccnb1ip1D3Z3K2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Gm8318-201ENSMUST00000182954 872 ntBASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Gm37722-201ENSMUST00000193757 208 ntBASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Gm37179-201ENSMUST00000194862 823 ntBASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccnb1ip1D3Z3K2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms