Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
Shank1D3YZU1 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Gm15678-201ENSMUST00000117573 960 ntBASIC13.07□□□□□ -0.32
Shank1D3YZU1 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.07□□□□□ -0.32
Shank1D3YZU1 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Gm9229-201ENSMUST00000222777 126 ntBASIC13.07□□□□□ -0.32
Shank1D3YZU1 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.07□□□□□ -0.32
Shank1D3YZU1 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.07□□□□□ -0.32
Shank1D3YZU1 Gm2451-201ENSMUST00000199447 999 ntBASIC13.07□□□□□ -0.32
Shank1D3YZU1 Gm10290-201ENSMUST00000200451 999 ntBASIC13.07□□□□□ -0.32
Shank1D3YZU1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Shank1D3YZU1 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.06□□□□□ -0.32
Shank1D3YZU1 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.06□□□□□ -0.32
Shank1D3YZU1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shank1D3YZU1 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Mir6392-201ENSMUST00000184924 108 ntBASIC13.05□□□□□ -0.32
Shank1D3YZU1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms