Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Gm15358-201ENSMUST00000119249 520 ntBASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Mir3081-201ENSMUST00000175305 84 ntBASIC11.83□□□□□ -0.52
Gm12887B1AVM1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.82□□□□□ -0.52
Gm12887B1AVM1 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm12887B1AVM1 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Gm11453-201ENSMUST00000117318 1007 ntBASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm12887B1AVM1 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm12887B1AVM1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms