Protein–RNA interactions for Protein: A7VMS3

H2-M5, Histocompatibility 2, M region locus 5, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-M5A7VMS3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2-M5A7VMS3 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2-M5A7VMS3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2-M5A7VMS3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.45□□□□□ -0.42
H2-M5A7VMS3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Gm6973-201ENSMUST00000117080 721 ntBASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Gm43474-201ENSMUST00000196415 774 ntBASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Celf4-206ENSMUST00000224553 1729 ntBASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2-M5A7VMS3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Gm24158-201ENSMUST00000175263 71 ntBASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Gm10253-201ENSMUST00000194270 940 ntBASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2-M5A7VMS3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.42□□□□□ -0.42
H2-M5A7VMS3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2-M5A7VMS3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
H2-M5A7VMS3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2-M5A7VMS3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2-M5A7VMS3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H2-M5A7VMS3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.42□□□□□ -0.42
H2-M5A7VMS3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2-M5A7VMS3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
H2-M5A7VMS3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2-M5A7VMS3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2-M5A7VMS3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2-M5A7VMS3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2-M5A7VMS3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2-M5A7VMS3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H2-M5A7VMS3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2-M5A7VMS3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2-M5A7VMS3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms