Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 Gm18669-201ENSMUST00000216049 778 ntBASIC12.97□□□□□ -0.33
Gm11127A7VMS2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.97□□□□□ -0.33
Gm11127A7VMS2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.97□□□□□ -0.33
Gm11127A7VMS2 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.96□□□□□ -0.33
Gm11127A7VMS2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm11127A7VMS2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Gm11127A7VMS2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Gm11127A7VMS2 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Gm11127A7VMS2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm11127A7VMS2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Gm11127A7VMS2 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Gm11127A7VMS2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm11127A7VMS2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm11127A7VMS2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm11127A7VMS2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm11127A7VMS2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm11127A7VMS2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.96□□□□□ -0.34
Gm11127A7VMS2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Gm14722-201ENSMUST00000118943 689 ntBASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Ank2-226ENSMUST00000189368 339 ntBASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Gm11127A7VMS2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms