Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Gm12585-201ENSMUST00000117307 290 ntBASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.18□□□□□ -0.14
Col9a3A2ACT7 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a3A2ACT7 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Gm17150-201ENSMUST00000165577 381 ntBASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a3A2ACT7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Gm15678-201ENSMUST00000117573 960 ntBASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Gm15393-201ENSMUST00000120499 219 ntBASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Gm18062-201ENSMUST00000208020 547 ntBASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Gm18055-201ENSMUST00000208254 547 ntBASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col9a3A2ACT7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms