Protein–RNA interactions for Protein: A2A8L1

Chd5, Chromodomain-helicase-DNA-binding protein 5, mousemouse

Predictions only

Length 1,946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd5A2A8L1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chd5A2A8L1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd5A2A8L1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd5A2A8L1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd5A2A8L1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd5A2A8L1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd5A2A8L1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chd5A2A8L1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd5A2A8L1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chd5A2A8L1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd5A2A8L1 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Chd5A2A8L1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
Chd5A2A8L1 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chd5A2A8L1 Gm19078-201ENSMUST00000206311 727 ntBASIC16.72■□□□□ 0.27
Chd5A2A8L1 Gm5035-201ENSMUST00000215581 927 ntBASIC16.72■□□□□ 0.27
Chd5A2A8L1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd5A2A8L1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd5A2A8L1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd5A2A8L1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.71■□□□□ 0.27
Chd5A2A8L1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.71■□□□□ 0.27
Chd5A2A8L1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd5A2A8L1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd5A2A8L1 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd5A2A8L1 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC16.71■□□□□ 0.27
Chd5A2A8L1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Chd5A2A8L1 Gm8602-201ENSMUST00000184045 607 ntBASIC16.71■□□□□ 0.27
Chd5A2A8L1 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Chd5A2A8L1 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.71■□□□□ 0.27
Chd5A2A8L1 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.71■□□□□ 0.27
Chd5A2A8L1 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd5A2A8L1 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd5A2A8L1 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd5A2A8L1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd5A2A8L1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd5A2A8L1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Chd5A2A8L1 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.71■□□□□ 0.26
Chd5A2A8L1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.7■□□□□ 0.26
Chd5A2A8L1 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.7■□□□□ 0.26
Chd5A2A8L1 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd5A2A8L1 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.7■□□□□ 0.26
Chd5A2A8L1 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd5A2A8L1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Gm17150-201ENSMUST00000165577 381 ntBASIC16.7■□□□□ 0.26
Chd5A2A8L1 Gm6266-201ENSMUST00000203844 806 ntBASIC16.7■□□□□ 0.26
Chd5A2A8L1 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Chd5A2A8L1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd5A2A8L1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chd5A2A8L1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd5A2A8L1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chd5A2A8L1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd5A2A8L1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd5A2A8L1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd5A2A8L1 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd5A2A8L1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.69■□□□□ 0.26
Chd5A2A8L1 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chd5A2A8L1 Gm18905-201ENSMUST00000205454 928 ntBASIC16.69■□□□□ 0.26
Chd5A2A8L1 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd5A2A8L1 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chd5A2A8L1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd5A2A8L1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Chd5A2A8L1 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.69■□□□□ 0.26
Chd5A2A8L1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd5A2A8L1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Chd5A2A8L1 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Chd5A2A8L1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd5A2A8L1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd5A2A8L1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd5A2A8L1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd5A2A8L1 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd5A2A8L1 AY702102-202ENSMUST00000194651 1173 ntBASIC16.68■□□□□ 0.26
Chd5A2A8L1 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.68■□□□□ 0.26
Chd5A2A8L1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd5A2A8L1 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd5A2A8L1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd5A2A8L1 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd5A2A8L1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Chd5A2A8L1 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms