Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gm14859-201ENSMUST00000117752 357 ntBASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Gm13464-201ENSMUST00000119418 935 ntBASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Gm11764-201ENSMUST00000120221 623 ntBASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Gm13836-201ENSMUST00000121159 501 ntBASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav12d-1A0N8R0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Gm7222-201ENSMUST00000117512 906 ntBASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Gm14042-201ENSMUST00000120139 833 ntBASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav12d-1A0N8R0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Gm17807-201ENSMUST00000186869 298 ntBASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms