Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm45504-201ENSMUST00000211407 2107 ntBASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm11960-202ENSMUST00000181063 2858 ntBASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm5364-201ENSMUST00000216789 889 ntBASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Psmb5-202ENSMUST00000227257 622 ntBASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm10154-201ENSMUST00000084445 354 ntBASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms