Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav17A0A075B655 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav17A0A075B655 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Trav17A0A075B655 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav17A0A075B655 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav17A0A075B655 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Trav17A0A075B655 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav17A0A075B655 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav17A0A075B655 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav17A0A075B655 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav17A0A075B655 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav17A0A075B655 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav17A0A075B655 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav17A0A075B655 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav17A0A075B655 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.61□□□□□ -0.55
Trav17A0A075B655 Gm12644-201ENSMUST00000119935 606 ntBASIC11.61□□□□□ -0.55
Trav17A0A075B655 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.61□□□□□ -0.55
Trav17A0A075B655 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.61□□□□□ -0.55
Trav17A0A075B655 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Trav17A0A075B655 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav17A0A075B655 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.6□□□□□ -0.55
Trav17A0A075B655 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav17A0A075B655 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav17A0A075B655 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav17A0A075B655 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav17A0A075B655 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.6□□□□□ -0.55
Trav17A0A075B655 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav17A0A075B655 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav17A0A075B655 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms