Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.31□□□□□ -0.6
Trav16A0A075B653 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Gm25016-201ENSMUST00000158399 131 ntBASIC11.31□□□□□ -0.6
Trav16A0A075B653 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.31□□□□□ -0.6
Trav16A0A075B653 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.31□□□□□ -0.6
Trav16A0A075B653 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16A0A075B653 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Trav16A0A075B653 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Gm15165-201ENSMUST00000118140 502 ntBASIC11.3□□□□□ -0.6
Trav16A0A075B653 Gm4459-201ENSMUST00000118750 468 ntBASIC11.3□□□□□ -0.6
Trav16A0A075B653 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Gm29518-201ENSMUST00000190858 372 ntBASIC11.3□□□□□ -0.6
Trav16A0A075B653 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.3□□□□□ -0.6
Trav16A0A075B653 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16A0A075B653 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16A0A075B653 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16A0A075B653 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16A0A075B653 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16A0A075B653 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16A0A075B653 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Trav16A0A075B653 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16A0A075B653 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16A0A075B653 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav16A0A075B653 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16A0A075B653 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16A0A075B653 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav16A0A075B653 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms