Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
PdfS4R2K0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.26□□□□□ -0.61
PdfS4R2K0 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdfS4R2K0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
PdfS4R2K0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
PdfS4R2K0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.25□□□□□ -0.61
PdfS4R2K0 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
PdfS4R2K0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Matn2-206ENSMUST00000228570 2798 ntBASIC11.25□□□□□ -0.61
PdfS4R2K0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
PdfS4R2K0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Gm12895-201ENSMUST00000122214 226 ntBASIC11.25□□□□□ -0.61
PdfS4R2K0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.25□□□□□ -0.61
PdfS4R2K0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.25□□□□□ -0.61
PdfS4R2K0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.25□□□□□ -0.61
PdfS4R2K0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.25□□□□□ -0.61
PdfS4R2K0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
PdfS4R2K0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.25□□□□□ -0.61
PdfS4R2K0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
PdfS4R2K0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
PdfS4R2K0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdfS4R2K0 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdfS4R2K0 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.24□□□□□ -0.61
PdfS4R2K0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
PdfS4R2K0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdfS4R2K0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdfS4R2K0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdfS4R2K0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdfS4R2K0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdfS4R2K0 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
PdfS4R2K0 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdfS4R2K0 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
PdfS4R2K0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdfS4R2K0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdfS4R2K0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdfS4R2K0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
PdfS4R2K0 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.24□□□□□ -0.61
PdfS4R2K0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
PdfS4R2K0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
PdfS4R2K0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
PdfS4R2K0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
PdfS4R2K0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.24□□□□□ -0.61
PdfS4R2K0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdfS4R2K0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.24□□□□□ -0.61
PdfS4R2K0 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.24□□□□□ -0.61
PdfS4R2K0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.24□□□□□ -0.61
PdfS4R2K0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdfS4R2K0 Birc2-201ENSMUST00000054878 378 ntBASIC11.24□□□□□ -0.61
PdfS4R2K0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
PdfS4R2K0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
PdfS4R2K0 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdfS4R2K0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
PdfS4R2K0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdfS4R2K0 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdfS4R2K0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
PdfS4R2K0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdfS4R2K0 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.24□□□□□ -0.61
PdfS4R2K0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdfS4R2K0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdfS4R2K0 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
PdfS4R2K0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PdfS4R2K0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
PdfS4R2K0 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdfS4R2K0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
PdfS4R2K0 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.23□□□□□ -0.61
PdfS4R2K0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdfS4R2K0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PdfS4R2K0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdfS4R2K0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms