Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Gm12008-201ENSMUST00000117791 755 ntBASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Gm18246-201ENSMUST00000221023 728 ntBASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
H2afb3S4R1G7 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.17□□□□□ -0.3
H2afb3S4R1G7 AV026068-213ENSMUST00000223675 1171 ntBASIC13.17□□□□□ -0.3
H2afb3S4R1G7 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb3S4R1G7 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb3S4R1G7 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms