Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Mir6990-201ENSMUST00000183724 91 ntBASIC13.48□□□□□ -0.25
Phf1Q9Z1B8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.48□□□□□ -0.25
Phf1Q9Z1B8 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Phf1Q9Z1B8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Phf1Q9Z1B8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Phf1Q9Z1B8 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.48□□□□□ -0.25
Phf1Q9Z1B8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Phf1Q9Z1B8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Phf1Q9Z1B8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Phf1Q9Z1B8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.48□□□□□ -0.25
Phf1Q9Z1B8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Phf1Q9Z1B8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Phf1Q9Z1B8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Phf1Q9Z1B8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Phf1Q9Z1B8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Phf1Q9Z1B8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Phf1Q9Z1B8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Phf1Q9Z1B8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Rprl2-201ENSMUST00000157150 290 ntBASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Phf1Q9Z1B8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Gm43474-201ENSMUST00000196415 774 ntBASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Gm5312-201ENSMUST00000203728 547 ntBASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Phf1Q9Z1B8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Phf1Q9Z1B8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Phf1Q9Z1B8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Phf1Q9Z1B8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Phf1Q9Z1B8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Phf1Q9Z1B8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.46□□□□□ -0.26
Phf1Q9Z1B8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Phf1Q9Z1B8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Phf1Q9Z1B8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Phf1Q9Z1B8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Phf1Q9Z1B8 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Phf1Q9Z1B8 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.45□□□□□ -0.26
Phf1Q9Z1B8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms