Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Gm29667-201ENSMUST00000190817 490 ntBASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Scn8aQ9WTU3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Mir8102-201ENSMUST00000184148 139 ntBASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scn8aQ9WTU3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Gm5866-201ENSMUST00000177881 973 ntBASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Gm6916-202ENSMUST00000205523 195 ntBASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Gm44608-201ENSMUST00000206827 855 ntBASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scn8aQ9WTU3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms