Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Gm17271-201ENSMUST00000165535 355 ntBASIC13.01□□□□□ -0.33
Nubp2Q9R061 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.01□□□□□ -0.33
Nubp2Q9R061 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.01□□□□□ -0.33
Nubp2Q9R061 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nubp2Q9R061 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nubp2Q9R061 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nubp2Q9R061 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13□□□□□ -0.33
Nubp2Q9R061 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nubp2Q9R061 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13□□□□□ -0.33
Nubp2Q9R061 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp2Q9R061 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Nubp2Q9R061 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13□□□□□ -0.33
Nubp2Q9R061 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13□□□□□ -0.33
Nubp2Q9R061 Gm8242-201ENSMUST00000193029 1420 ntBASIC13□□□□□ -0.33
Nubp2Q9R061 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nubp2Q9R061 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp2Q9R061 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13□□□□□ -0.33
Nubp2Q9R061 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp2Q9R061 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nubp2Q9R061 Gm4913-201ENSMUST00000117075 1290 ntBASIC13□□□□□ -0.33
Nubp2Q9R061 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp2Q9R061 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nubp2Q9R061 Gm8318-201ENSMUST00000182954 872 ntBASIC13□□□□□ -0.33
Nubp2Q9R061 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13□□□□□ -0.33
Nubp2Q9R061 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13□□□□□ -0.33
Nubp2Q9R061 AC159295.1-201ENSMUST00000225326 940 ntBASIC13□□□□□ -0.33
Nubp2Q9R061 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp2Q9R061 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nubp2Q9R061 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13□□□□□ -0.33
Nubp2Q9R061 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp2Q9R061 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13□□□□□ -0.33
Nubp2Q9R061 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp2Q9R061 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nubp2Q9R061 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp2Q9R061 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nubp2Q9R061 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13□□□□□ -0.33
Nubp2Q9R061 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp2Q9R061 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp2Q9R061 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nubp2Q9R061 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.99□□□□□ -0.33
Nubp2Q9R061 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Gm4995-201ENSMUST00000117247 432 ntBASIC12.99□□□□□ -0.33
Nubp2Q9R061 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.99□□□□□ -0.33
Nubp2Q9R061 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Gm43575-201ENSMUST00000196420 516 ntBASIC12.99□□□□□ -0.33
Nubp2Q9R061 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.99□□□□□ -0.33
Nubp2Q9R061 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
Nubp2Q9R061 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.99□□□□□ -0.33
Nubp2Q9R061 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms