Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nubp1Q9R060 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Gm16026-204ENSMUST00000162652 683 ntBASIC12.93□□□□□ -0.34
Nubp1Q9R060 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Gm28630-201ENSMUST00000187806 498 ntBASIC12.93□□□□□ -0.34
Nubp1Q9R060 Gm8515-201ENSMUST00000194852 576 ntBASIC12.93□□□□□ -0.34
Nubp1Q9R060 Gm45276-201ENSMUST00000209549 1086 ntBASIC12.93□□□□□ -0.34
Nubp1Q9R060 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC12.93□□□□□ -0.34
Nubp1Q9R060 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.93□□□□□ -0.34
Nubp1Q9R060 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.93□□□□□ -0.34
Nubp1Q9R060 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nubp1Q9R060 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.92□□□□□ -0.34
Nubp1Q9R060 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.92□□□□□ -0.34
Nubp1Q9R060 Gm18062-201ENSMUST00000208020 547 ntBASIC12.92□□□□□ -0.34
Nubp1Q9R060 Gm18055-201ENSMUST00000208254 547 ntBASIC12.92□□□□□ -0.34
Nubp1Q9R060 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nubp1Q9R060 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.92□□□□□ -0.34
Nubp1Q9R060 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.92□□□□□ -0.34
Nubp1Q9R060 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.92□□□□□ -0.34
Nubp1Q9R060 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nubp1Q9R060 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms