Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.2□□□□□ -0.3
Sec61a2Q9JLR1 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Gm9727-201ENSMUST00000161387 555 ntBASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sec61a2Q9JLR1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Gm4995-201ENSMUST00000117247 432 ntBASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Gm11594-201ENSMUST00000122313 162 ntBASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Gm8000-201ENSMUST00000188378 592 ntBASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sec61a2Q9JLR1 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a2Q9JLR1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a2Q9JLR1 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Sec61a2Q9JLR1 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.17□□□□□ -0.3
Sec61a2Q9JLR1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a2Q9JLR1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a2Q9JLR1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a2Q9JLR1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sec61a2Q9JLR1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.17□□□□□ -0.3
Sec61a2Q9JLR1 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms