Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Tnfrsf13bQ9ET35 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Gm5682-201ENSMUST00000173402 505 ntBASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf13bQ9ET35 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Gm8749-201ENSMUST00000117737 331 ntBASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Gm9726-201ENSMUST00000180321 678 ntBASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf13bQ9ET35 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf13bQ9ET35 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms