Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1cQ9ES64 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1cQ9ES64 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1cQ9ES64 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1cQ9ES64 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Ush1cQ9ES64 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1cQ9ES64 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.79■□□□□ 0.28
Ush1cQ9ES64 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.79■□□□□ 0.28
Ush1cQ9ES64 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Ush1cQ9ES64 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.79■□□□□ 0.28
Ush1cQ9ES64 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1cQ9ES64 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1cQ9ES64 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1cQ9ES64 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1cQ9ES64 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1cQ9ES64 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ush1cQ9ES64 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1cQ9ES64 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1cQ9ES64 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Gm18669-201ENSMUST00000216049 778 ntBASIC16.78■□□□□ 0.28
Ush1cQ9ES64 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Gm38094-201ENSMUST00000195864 2978 ntBASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1cQ9ES64 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ush1cQ9ES64 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ush1cQ9ES64 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ush1cQ9ES64 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
Ush1cQ9ES64 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ush1cQ9ES64 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ush1cQ9ES64 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ush1cQ9ES64 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Ush1cQ9ES64 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.77■□□□□ 0.28
Ush1cQ9ES64 Mir3081-201ENSMUST00000175305 84 ntBASIC16.77■□□□□ 0.28
Ush1cQ9ES64 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ush1cQ9ES64 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ush1cQ9ES64 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ush1cQ9ES64 Gm28033-201ENSMUST00000184224 96 ntBASIC16.77■□□□□ 0.28
Ush1cQ9ES64 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ush1cQ9ES64 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ush1cQ9ES64 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ush1cQ9ES64 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ush1cQ9ES64 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.77■□□□□ 0.27
Ush1cQ9ES64 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ush1cQ9ES64 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ush1cQ9ES64 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
Ush1cQ9ES64 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ush1cQ9ES64 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ush1cQ9ES64 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ush1cQ9ES64 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.76■□□□□ 0.27
Ush1cQ9ES64 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ush1cQ9ES64 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ush1cQ9ES64 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ush1cQ9ES64 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ush1cQ9ES64 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.76■□□□□ 0.27
Ush1cQ9ES64 Gm42928-201ENSMUST00000197338 3339 ntBASIC16.76■□□□□ 0.27
Ush1cQ9ES64 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ush1cQ9ES64 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ush1cQ9ES64 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Ush1cQ9ES64 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ush1cQ9ES64 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ush1cQ9ES64 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.76■□□□□ 0.27
Ush1cQ9ES64 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.76■□□□□ 0.27
Ush1cQ9ES64 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.76■□□□□ 0.27
Ush1cQ9ES64 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.76■□□□□ 0.27
Ush1cQ9ES64 Gm27357-201ENSMUST00000183754 135 ntBASIC16.76■□□□□ 0.27
Ush1cQ9ES64 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ush1cQ9ES64 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ush1cQ9ES64 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ush1cQ9ES64 AC153366.2-201ENSMUST00000219461 1984 ntBASIC16.76■□□□□ 0.27
Ush1cQ9ES64 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ush1cQ9ES64 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms