Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lima1Q9ERG0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.48□□□□□ -0.09
Lima1Q9ERG0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lima1Q9ERG0 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.48□□□□□ -0.09
Lima1Q9ERG0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lima1Q9ERG0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lima1Q9ERG0 Gm6376-201ENSMUST00000209407 580 ntBASIC14.48□□□□□ -0.09
Lima1Q9ERG0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.48□□□□□ -0.09
Lima1Q9ERG0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lima1Q9ERG0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lima1Q9ERG0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lima1Q9ERG0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lima1Q9ERG0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Lima1Q9ERG0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lima1Q9ERG0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lima1Q9ERG0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lima1Q9ERG0 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lima1Q9ERG0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lima1Q9ERG0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lima1Q9ERG0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lima1Q9ERG0 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lima1Q9ERG0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lima1Q9ERG0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lima1Q9ERG0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.46□□□□□ -0.09
Lima1Q9ERG0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lima1Q9ERG0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Lima1Q9ERG0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lima1Q9ERG0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.46□□□□□ -0.09
Lima1Q9ERG0 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.46□□□□□ -0.09
Lima1Q9ERG0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lima1Q9ERG0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lima1Q9ERG0 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lima1Q9ERG0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lima1Q9ERG0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lima1Q9ERG0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Lima1Q9ERG0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lima1Q9ERG0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lima1Q9ERG0 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lima1Q9ERG0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lima1Q9ERG0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lima1Q9ERG0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Lima1Q9ERG0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.46□□□□□ -0.09
Lima1Q9ERG0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lima1Q9ERG0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lima1Q9ERG0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lima1Q9ERG0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Lima1Q9ERG0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Lima1Q9ERG0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lima1Q9ERG0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms