Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Gm13597-201ENSMUST00000121239 375 ntBASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Gm25925-201ENSMUST00000158314 306 ntBASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tubb3Q9ERD7 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tubb3Q9ERD7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms