Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rtp4Q9ER80 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rtp4Q9ER80 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rtp4Q9ER80 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.71□□□□□ -0.21
Rtp4Q9ER80 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Gm43474-201ENSMUST00000196415 774 ntBASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Gm10154-201ENSMUST00000084445 354 ntBASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtp4Q9ER80 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rtp4Q9ER80 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rtp4Q9ER80 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rtp4Q9ER80 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Rtp4Q9ER80 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rtp4Q9ER80 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rtp4Q9ER80 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rtp4Q9ER80 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Rtp4Q9ER80 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Rtp4Q9ER80 Carlr-201ENSMUST00000181515 2574 ntBASIC13.71□□□□□ -0.22
Rtp4Q9ER80 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rtp4Q9ER80 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rtp4Q9ER80 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rtp4Q9ER80 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rtp4Q9ER80 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Gm2272-201ENSMUST00000194903 582 ntBASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Celf4-206ENSMUST00000224553 1729 ntBASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtp4Q9ER80 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rtp4Q9ER80 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtp4Q9ER80 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rtp4Q9ER80 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtp4Q9ER80 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtp4Q9ER80 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtp4Q9ER80 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtp4Q9ER80 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rtp4Q9ER80 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtp4Q9ER80 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtp4Q9ER80 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtp4Q9ER80 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rtp4Q9ER80 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rtp4Q9ER80 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rtp4Q9ER80 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rtp4Q9ER80 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rtp4Q9ER80 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms