Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm37835-201ENSMUST00000193305 361 ntBASIC16.38■□□□□ 0.21
Upf1Q9EPU0 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Upf1Q9EPU0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC16.38■□□□□ 0.21
Upf1Q9EPU0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.38■□□□□ 0.21
Upf1Q9EPU0 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC16.38■□□□□ 0.21
Upf1Q9EPU0 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upf1Q9EPU0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upf1Q9EPU0 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upf1Q9EPU0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upf1Q9EPU0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upf1Q9EPU0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upf1Q9EPU0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upf1Q9EPU0 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Upf1Q9EPU0 Dancr-204ENSMUST00000132389 2347 ntBASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Selenot-ps-201ENSMUST00000119098 593 ntBASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Gm27438-201ENSMUST00000183480 110 ntBASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.37■□□□□ 0.21
Upf1Q9EPU0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Gm6152-201ENSMUST00000151704 340 ntBASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Gm37489-201ENSMUST00000191883 159 ntBASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upf1Q9EPU0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Upf1Q9EPU0 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Gm13813-201ENSMUST00000120998 787 ntBASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Gm12134-201ENSMUST00000122109 520 ntBASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Gm26927-201ENSMUST00000182385 965 ntBASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Gm2260-201ENSMUST00000184965 657 ntBASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Gm44985-201ENSMUST00000206202 1016 ntBASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.35■□□□□ 0.21
Upf1Q9EPU0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Upf1Q9EPU0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms