Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnft1Q9DCN7 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnft1Q9DCN7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Gm11764-201ENSMUST00000120221 623 ntBASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Gm9726-201ENSMUST00000180321 678 ntBASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Gm18246-201ENSMUST00000221023 728 ntBASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms