Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm45453-201ENSMUST00000211758 853 ntBASIC14.3□□□□□ -0.12
Rrp8Q9DB85 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrp8Q9DB85 Gm9229-201ENSMUST00000222777 126 ntBASIC14.3□□□□□ -0.12
Rrp8Q9DB85 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrp8Q9DB85 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rrp8Q9DB85 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.3□□□□□ -0.12
Rrp8Q9DB85 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rrp8Q9DB85 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrp8Q9DB85 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrp8Q9DB85 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrp8Q9DB85 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrp8Q9DB85 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrp8Q9DB85 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.3□□□□□ -0.12
Rrp8Q9DB85 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rrp8Q9DB85 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rrp8Q9DB85 Sybu-209ENSMUST00000228639 4113 ntBASIC14.3□□□□□ -0.12
Rrp8Q9DB85 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Gm9522-201ENSMUST00000182394 926 ntBASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Gm18018-201ENSMUST00000198273 408 ntBASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Gm45384-201ENSMUST00000210451 277 ntBASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Gm6180-201ENSMUST00000065243 498 ntBASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrp8Q9DB85 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Gm42612-201ENSMUST00000197986 623 ntBASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Gm43170-201ENSMUST00000199827 612 ntBASIC14.28□□□□□ -0.12
Rrp8Q9DB85 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrp8Q9DB85 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rrp8Q9DB85 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rrp8Q9DB85 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Rrp8Q9DB85 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rrp8Q9DB85 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rrp8Q9DB85 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rrp8Q9DB85 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rrp8Q9DB85 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 Gm14042-201ENSMUST00000120139 833 ntBASIC14.27□□□□□ -0.13
Rrp8Q9DB85 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms