Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Chmp4bQ9D8B3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp4bQ9D8B3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp4bQ9D8B3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Chmp4bQ9D8B3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp4bQ9D8B3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp4bQ9D8B3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp4bQ9D8B3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Chmp4bQ9D8B3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC18.39■□□□□ 0.54
Chmp4bQ9D8B3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.39■□□□□ 0.54
Chmp4bQ9D8B3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
Chmp4bQ9D8B3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Chmp4bQ9D8B3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp4bQ9D8B3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Chmp4bQ9D8B3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp4bQ9D8B3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp4bQ9D8B3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.39■□□□□ 0.53
Chmp4bQ9D8B3 Gm17271-201ENSMUST00000165535 355 ntBASIC18.39■□□□□ 0.53
Chmp4bQ9D8B3 Gm45098-201ENSMUST00000207179 657 ntBASIC18.39■□□□□ 0.53
Chmp4bQ9D8B3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.39■□□□□ 0.53
Chmp4bQ9D8B3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp4bQ9D8B3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp4bQ9D8B3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp4bQ9D8B3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp4bQ9D8B3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp4bQ9D8B3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp4bQ9D8B3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp4bQ9D8B3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp4bQ9D8B3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp4bQ9D8B3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Chmp4bQ9D8B3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp4bQ9D8B3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp4bQ9D8B3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Chmp4bQ9D8B3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4bQ9D8B3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4bQ9D8B3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.38■□□□□ 0.53
Chmp4bQ9D8B3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.38■□□□□ 0.53
Chmp4bQ9D8B3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.38■□□□□ 0.53
Chmp4bQ9D8B3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Chmp4bQ9D8B3 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4bQ9D8B3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4bQ9D8B3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4bQ9D8B3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4bQ9D8B3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Chmp4bQ9D8B3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4bQ9D8B3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Chmp4bQ9D8B3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4bQ9D8B3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4bQ9D8B3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4bQ9D8B3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp4bQ9D8B3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.38■□□□□ 0.53
Chmp4bQ9D8B3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
Chmp4bQ9D8B3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Tcf21-202ENSMUST00000218002 1788 ntBASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Rpph1-201ENSMUST00000175096 319 ntBASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp4bQ9D8B3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Gm15467-201ENSMUST00000120582 445 ntBASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Gm5479-201ENSMUST00000160578 435 ntBASIC18.36■□□□□ 0.53
Chmp4bQ9D8B3 Gm18737-201ENSMUST00000173594 937 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms