Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
U2af1Q9D883 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
U2af1Q9D883 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
U2af1Q9D883 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
U2af1Q9D883 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
U2af1Q9D883 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
U2af1Q9D883 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
U2af1Q9D883 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
U2af1Q9D883 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
U2af1Q9D883 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
U2af1Q9D883 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
U2af1Q9D883 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
U2af1Q9D883 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC19.23■□□□□ 0.67
U2af1Q9D883 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
U2af1Q9D883 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
U2af1Q9D883 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
U2af1Q9D883 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
U2af1Q9D883 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
U2af1Q9D883 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
U2af1Q9D883 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
U2af1Q9D883 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
U2af1Q9D883 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
U2af1Q9D883 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
U2af1Q9D883 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
U2af1Q9D883 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
U2af1Q9D883 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
U2af1Q9D883 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
U2af1Q9D883 Gm13517-201ENSMUST00000120782 1495 ntBASIC19.22■□□□□ 0.67
U2af1Q9D883 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
U2af1Q9D883 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
U2af1Q9D883 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
U2af1Q9D883 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC19.22■□□□□ 0.67
U2af1Q9D883 Gm13823-201ENSMUST00000119930 345 ntBASIC19.22■□□□□ 0.67
U2af1Q9D883 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
U2af1Q9D883 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
U2af1Q9D883 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
U2af1Q9D883 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
U2af1Q9D883 Gm10605-202ENSMUST00000183019 3198 ntBASIC19.22■□□□□ 0.67
U2af1Q9D883 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
U2af1Q9D883 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2af1Q9D883 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2af1Q9D883 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
U2af1Q9D883 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
U2af1Q9D883 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2af1Q9D883 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
U2af1Q9D883 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2af1Q9D883 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2af1Q9D883 Gm6539-201ENSMUST00000119157 1064 ntBASIC19.21■□□□□ 0.67
U2af1Q9D883 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2af1Q9D883 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
U2af1Q9D883 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2af1Q9D883 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2af1Q9D883 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2af1Q9D883 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
U2af1Q9D883 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2af1Q9D883 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
U2af1Q9D883 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2af1Q9D883 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2af1Q9D883 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2af1Q9D883 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
U2af1Q9D883 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2af1Q9D883 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
U2af1Q9D883 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC19.2■□□□□ 0.66
U2af1Q9D883 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
U2af1Q9D883 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
U2af1Q9D883 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
U2af1Q9D883 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
U2af1Q9D883 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
U2af1Q9D883 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
U2af1Q9D883 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC19.2■□□□□ 0.66
U2af1Q9D883 Gm9768-201ENSMUST00000206007 2861 ntBASIC19.2■□□□□ 0.66
U2af1Q9D883 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
U2af1Q9D883 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
U2af1Q9D883 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC19.2■□□□□ 0.66
U2af1Q9D883 Auts2-212ENSMUST00000178555 309 ntBASIC19.2■□□□□ 0.66
U2af1Q9D883 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
U2af1Q9D883 Gm38294-201ENSMUST00000192831 381 ntBASIC19.2■□□□□ 0.66
U2af1Q9D883 AC159114.1-201ENSMUST00000220349 266 ntBASIC19.2■□□□□ 0.66
U2af1Q9D883 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
U2af1Q9D883 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
U2af1Q9D883 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
U2af1Q9D883 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
U2af1Q9D883 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
U2af1Q9D883 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
U2af1Q9D883 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
U2af1Q9D883 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
U2af1Q9D883 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
U2af1Q9D883 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
U2af1Q9D883 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
U2af1Q9D883 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2af1Q9D883 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
U2af1Q9D883 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2af1Q9D883 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2af1Q9D883 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2af1Q9D883 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2af1Q9D883 Gm8410-201ENSMUST00000117225 605 ntBASIC19.19■□□□□ 0.66
U2af1Q9D883 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC19.19■□□□□ 0.66
U2af1Q9D883 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
U2af1Q9D883 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2af1Q9D883 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms